In the meantime, I prepared a code that may be able to list infected files, that you can add in the file administrator / components / com_acym / controllers / configuration / Listing.php in the function "listing":
$maliciousFiles = [];
$siteFiles = acym_getFiles(ACYM_ROOT, '.', true, true);
foreach ($siteFiles as $oneFileName) {
    $lastSlashPos = strrpos($oneFileName, '/');
    if (!empty($lastSlashPos) && strpos($oneFileName, ACYM_UPLOAD_FOLDER_THUMBNAIL) !== false && preg_match(
            '/.*thumbnail.*php.*$/',
            substr($oneFileName, $lastSlashPos + 1)
        )) {
        $maliciousFiles[] = $oneFileName;
    } elseif (filesize($oneFileName) < 10000) {
        $fileContent = file_get_contents($oneFileName);
        if (preg_match('/^<\?php\n\$[a-z]+\s*=\s*\$_COOKIE\s*;/Ui', $fileContent) || preg_match('/^<\?php echo "jm"\."te"\."st"; \?>$/U', $fileContent)) {
            $maliciousFiles[] = $oneFileName;
        }
    }
}
if (empty($maliciousFiles)) {
    acym_enqueueMessage('No malicious file detected', 'info');
} else {
    $message = 'Potentially malicious files detected:';
    $message .= '<ul><li>'.implode('</li><li>', $maliciousFiles).'</li></ul>';
    acym_enqueueMessage($message, 'error');
}
It should look like this:

Once done, a message should appear at the top of the AcyMailing configuration page which should look like this if it finds something:

This code only lists the files, it doesn't remove them.